Biodiversity Data Journal Biodiversity Data Journal Biodiversity Data Journal BDJ 1314-2836 1314-2828 Pensoft Publishers Biodiversity Data Journal 10.3897/BDJ.3.e5825 4311 Taxonomic paper Animalia Biogeography Asia New distribution records for the critically endangered frog Indirana gundia (Dubois, 1986) from Kerala part of Western Ghats, India Jesmina Abdulrasheed Safia George Sanil sgeorge@rgcb.res.in Rajiv Gandhi Centre for Biotechnology, Trivandrum, India

Corresponding author: Sanil George (sgeorge@rgcb.res.in).

Academic editor: Diogo Provete

2015 11 08 2015 3 e5825 05 08 2015 10 08 2015 Abdulrasheed Safia Jesmina, Sanil George This is an open access article distributed under the terms of the Creative Commons Attribution License 4.0 (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Background

Indirana gundia is one of the critically endangered frog species of Western Ghats, India, and known only from the type locality (Gundya in Karnataka State, India) at an elevation of 200 m Mean Sea Level. We provide data on the geographical distribution of this species using molecular tools.

New information

Our results expand the geographical distribution range of this species about 111 km south up to the northern part of Kerala State and recorded at an elevation ranging from 115 m to 200 m asl.

Western Ghats Distribution Indirana gundia 16S ribosomal RNA Department of Biotechnology, Government of IndiaKSCSTE, Govt. of Kerala
Introduction

The genus Indirana is the only representative of the endemic amphibian family Ranixalidae in the Western Ghats, India with twelve valid species (Modak et al. 2015). Indirana gundia is classified as a critically endangered frog species as per the IUCN Red List of Threatened Species (IUCN 2015) and listed as the 88th of the 100 most Evolutionarily Distinct and Globally Endangered (EDGE) amphibians (http://www.edgeofexistence.org) of the world with an EDGE score of 5.65 (Isaac et al. 2007). The species was discovered in 1986 in the forests of Kemphole and Sakleshpur (12o49.50'N, 75o35.50'E), Karnatka, India, by Dubois 1986) and is known to occur only in the type locality (Gundya) at an altitude of 200 m asl. Morphology (Nair et al. 2012) and genetic data along with photographs (Padhye et al. 2014) of this species have been provided recently. In the absence of recent reports on the geographical distribution, the present study was designed to provide new distribution data of this species with the help of molecular tools.

Materials and methods

Visual encounter survey Method (Heyer et al. 1994) was adopted to capture thirteen individuals from Konnakkad, three from Kanamvayal and five from Aralam under the license from the Kerala Forest Department (No. WL-12-1713; Voucher numbers are given in Fig. 2). They were released immediately in their respective habitats after collecting toe clips. Since the mitochondrial DNA sequences are available for this species, we used 16S mitochondrial gene sequences to diagnose specimens from three localities: (1) Konnakkad (12°22'1"N, 75°22'21"E) (2) Kanamvayal (12°17'41.2"N, 75°28'38.0"E) and Aralam (11°52'43.7"N, 75°53'19.0"E) in the northern part of Kerala (Fig. 1). DNA was extracted from the collected toe clips using DNeasy Animal Blood and Tissue Kit (Qiagen). The genomic DNA was amplified with 16SA-L and 16SB-H primers (Palumbi et al. 1991) for 16S ribosomal RNA fragments of the mitochondrial gene as its utility in amphibian species identification is well established (Vences et al. 2005). The thermocycling conditions for the amplification of 16S gene as follows: 95°C for 5 min followed by 40 cycles of 95°C for 30s, 55°C for 40s, 72°C for 90s followed by a final extension step at 72° for 5 min. PCR products were purified and sequenced using an ABI 3730 capillary sequencer following manufacturer's instructions. We then compared the sequences with reference sequences of I. gundia from the type locality, available from GenBank (Acc. Numbers: KM386532 and KM386533), using BLAST. To further corroborate our results, we computed genetic distance (p-distance; Suppl. material 1) and maximum likelihood (ML) phylogenetic tree using MEGA 6 (Tamura et al. 2013) under K2+I model (Kimura 1980) as the best fitting model, along with the 16S sequences of other Indirana species distributed in Kerala (Fig. 2, Suppl. material 2). The obtained sequences (494 base pair in length) were deposited in GenBank under accession numbers KT282197-KT282223.

Taxon treatments Indirana gundia (Dubois, 1986) Distribution

The species was discovered in 1986 from forests of Kemphole and Sakleshpur (12°49.50' N, 75°35.50' E), Karnataka, India, by Dubois and is believed to occur only in the type locality (Gundya) at an altitude of 200 m asl.

Taxon discussion

The GenBank sequences matched exactly the extracted sequences of Indirana gundia (0.1%genetic distance) and clustered together in the ML tree, strongly suggesting that the distribution range of I. gundia extends through the continuous stretch of forests towards south up to Aralam region of the Kerala part of Western Ghats. Our results expand the distribution of I. gundia about 111 km south (Aralam) of its previously known range at an elevation of 137 m mean sea level. Konnakkad is approximately 56 km south of the type locality of I. gundia at an elevation of 115 m mean sea level followed by Kanamvayal (61 km; 172 m). This is the first distribution record of I. gundia in places other than the type locality.

Geographical distribution of a species is an important parameter in conservation biology. However, the Wallacean shortfall is evident in the Western Ghats as the exact distribution of many amphibian species in this region is poorly known. The data provided here on the distributional status of one of the critically endangered frog species of Western Ghats illuminating the use of molecular tools for delineating species boundaries effectively. The results may be helpful in designing further studies on biogeography and ecology and provide valuable insights for the conservation status of this species.

Acknowledgements

The authors thank Department of Forests, Govt. of Kerala for sampling permission and Sujith V. Gopalan for field assistance. This work was funded by Department of Biotechnology, Govt. of India (BT/IN/Finnish/11/SG/2008). JAS is thankful to Kerala State Council for Science, Technology and Environment for fellowship.

Author contributions

JAS performed molecular analysis. JAS and SG wrote the paper

References Dubois A 1986 Diagnose preliminaired'annonvean genre de Ranoidea (Amphibians, Anoures) dusnd de l'Inde Alytes 4 3 113 118 Heyer W. R Donnelly M. A McDiarmid R. W Hayek L. C. 1994 Measuring and Monitoring Biological Diversity: Standard Methods for Amphibians Smithsonian Institution Press Washington and London 364 Isaac N. J.B Turvey S. T. Collen B. Waterman C. Baillie J. E.M. 2007 Mammals on the EDGE: Conservation Priorities Based on Threat and Phylogeny PLoS ONE 2 3 e296 10.1371/journal.pone.0000296 The IUCN Red List of Threatened Species. Version 2015.1. http://www.iucnredlist.org 2015-07-31T00:00:00+03:00 Kimura M. 1980 A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16 111 120 10.1007/bf01731581 Modak Dahanukar N. Gosavi N. N. Padhye A. D. 2015 Indirana salelkari, a new species of leaping frog (Anura: Ranixalidae) from Western Ghats of Goa, India Journal of Threatened Taxa 7 9 7493 7509 10.11609/JoTT.o4262 Nair A. Gopalan S. V. George S. Kumar K. S. Teacher A. G.F. Merilä J. 2012 Endemic indirana frogs of western Ghats biodiversity hotspots Ann. Zool. Fennici 49 6 257 286 10.5735/086.049.0501 Padhye A. D Modak N. Dahanukar N. 2014 Indirana chiravasi, a new species of Leaping Frog (Anura: Ranixalidae) from Western Ghats of India Journal of Threatened Taxa 6 10 6293 6312 10.11609/JoTT.o4068.6293-312 Palumbi S. Martin A. Romano S. S. McMillan W. O. Stice L. Grabowski G. 1991 The simple fool’s guide to PCR Department of Zoology and Marine Laboratory, Universityof Hawaii 45 Tamura K Stecher G. Peterson D. Flipski A. Kumar S. 2013 MEGA 6: Molecular evolutionary genetics analysis version 6.0 Molecular Biology and Evolution 30 2725 2729 10.1093/molbev/mst197 Vences M. Thomas M. van der Meijden A. Chiari Y. Vieites D. R. 2005 Comparativ performance of the 16S rRNA gene in DNA barcoding of amphibians Front Zool. 2 1 12 10.1186/1742-9994-2-5

Map showing the localities where I. gundia occurs in Western Ghats.

Phylogenetic tree (ML) based on 16s mitochondrial DNA sequences of Indirana species distributed in Kerala part of Western Ghats, India.

Genetic distance (p-distance) of I. gundia samples

Data type: Genetic distance

File: oo_49139.doc

Abdulrasheed Safia Jesmina, Sanil George

Aligned sequences used for the construction of ML tree

Data type: DNA sequence

File: oo_49140.fas

Abdulrasheed Safia Jesmina, Sanil George